infrared.rna.BPComp Class Reference

Constrain complementarity of the base pair (i,j) More...

Inheritance diagram for infrared.rna.BPComp:

Collaboration diagram for infrared.rna.BPComp:

Detailed Description

Constrain complementarity of the base pair (i,j)

BPComp(i,j)

The constraint is satisfied if values at positions (i,j) form a valid canonical base pair, i.e. {(A,U), (C,G), (G,U)}.

Constraint for negation of BPComp

NotBPComp(i,j)

The constraint is satisfied if values at positions (i,j) DO NOT form a valid canonical base pair.

See also

BPComp

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The documentation for this class was generated from the following file:

• src/infrared/rna.py