Valentina Boeva's CV

phone: +33.1.69.33.41.12
e-mail: valeyo@mail333.ru

• Date of birth:
  March 9, 1981, Moscow, Russia; citizenship: Russian Federation
• Home address:
  Leningradskoe sh., 108–123 Moscow Russia 125195
• Education:
  June 2003: M.Sci. degree in Mathematics “Quadrant correlation coefficient”, Moscow State University, Department Mechanics and Mathematics.
  October 2006: Ph.D. in biophysics, Moscow State University,
  Department of Bioengineering and Bioinformatics.
  Subject of the thesis "Identification and analysis of tandem repeats and close structured signals in DNA"
• Research projects (in more detail):
  • Word analysis in DNA sequences
    
  • Development of the tool for tandem repeat searching in DNA
    sequences with evaluation of the repeat statistical significance
    http://bioinform.genetika.ru/projects/swan/www/
    
  • Analysis of minisatellites distributions in eukaryotic genomes.

1. Exact p-value calculation for heterotypic clusters of regulatory motifs and its application in computational annotation of cis-regulatory modules. V. Boeva, J. Clement , M. Regnier, M.A. Roytberg, V.J. Makeev. Algorithms for Molecular Biology, 2007, 2:13.
2. Short fuzzy tandem repeats in genomic sequences, identification, and possible role in regulation of gene expression. Boeva V, Regnier M, Papatsenko D, Makeev V. Bioinformatics, 2006, 22(6), pp.676-684.
3. Assessing the Significance of Sets of Words. V. Boeva, J. Clement, M. Regnier, and M. Vandenbogaert. Proceedings of Combinatorial Pattern Matching (CPM)2005, Jeju Island, Korea. Published online in Lecture Notes in Computer Science. V. 3537, pp. 358-370.
4. Relationship between micro- and minisatellites in the human genome. V.A. Boeva, M.V. Fridman, V.J. Makeev. Biofizika , 2006, 51(4), pp.650-655. [Article in Russian]
5. Micro- and Minisatellites in Human genome, TandemSWAN software in use. V.A. Boeva, V.J. Makeev. Proceedings of The Fifth International Conference on Bioinformatics of Genome Regulation and Structure , 2006, Novosibirsk, Russia, part 3, pp. 118-121.
6. SWAN: searching for highly divergent tandem repeats in DNA sequences with the evaluation of their statistical significance. V.A. Boeva, M. Regnier, V.J. Makeev. Proceedings of JOBIM 2004, Montreal, Canada, pp. 40.
7. Search for degenerate tandem repeats in nucleotide sequences. Their possible role in regulation of gene expression. V. Boeva, V.J. Makeev, M. Regnier. Proceedings of International conference MCCMB’05, 2005, Moscow, Russia, pp. 54-56.
8. Algorithm for searching for highly divergent tandem repeats in DNA sequences, statistical tests, and biological application in Drosophila melanogaster genome. V.A. Boeva, M. Regnier, V.J. Makeev. Proceedings of The Fourth International Conference on Bioinformatics of Genome Regulation and Structure, 2004, Novosibirsk,Russia, part 1, pp. 34-37.
9. Probability of tandem repeats in nucleotide sequences. V. Boeva, V.J. Makeev, M. Regnier. Proceedings of International conference MCCMB’03, 2003, Moscow, Russia, pp. 46-47.
10. Identification and analysis of tandem repeats and close structured signals in DNA. V.A. Boeva. PhD thesis, Moscow State University, Institute of Theoretical and Experimental Biophysics RAS, 2007, [rus].